No it won’t. There is another thread about that. (emonSD-17Oct19 Image partition sizes - #6 by borpin) The only solution is to include the changes and install from the Scripts directly.
It looks like you had a bad flash.
I’m not an expert on emonhub so cannot really help there. Have you searched the forum?
Posting the current emonhub.config will help.
Please put 3 ‘backticks’ ``` (top left of keyboard) on a line before and a line after to format code.